STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNGB3Cyclic nucleotide gated channel beta 3, tandem duplicate 2. (716 aa)    
Predicted Functional Partners:
LOC105008797
Cyclic nucleotide gated channel subunit alpha 1a.
  
0.732
cnga4
Cyclic nucleotide gated channel subunit alpha 4.
  
0.732
cnga2
Cyclic nucleotide gated channel alpha 2b.
  
0.731
LOC105019709
Cyclic nucleotide-binding domain-containing protein.
  
0.731
cnga1
Cyclic nucleotide gated channel subunit alpha 1b.
  
0.729
LOC105011336
Cyclic nucleotide gated channel subunit alpha 3a.
  
0.729
ENSELUP00000008537
Cyclic nucleotide gated channel subunit alpha 3a.
  
0.726
guca1b
Guanylate cyclase activator 1B.
   
 0.544
guca1a
Guanylate cyclase activator 1A.
   
 0.532
ENSELUP00000008886
Uncharacterized protein.
   
 0.530
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.