STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp44Ubiquitin carboxyl-terminal hydrolase. (743 aa)    
Predicted Functional Partners:
Trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.880
taf10
Uncharacterized protein.
    
 0.871
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.870
taf9
Uncharacterized protein.
    
 0.864
rps27a
Ribosomal protein S27a.
    
 0.858
sgf29
SAGA complex associated factor 29.
   
 0.816
tada2a
Transcriptional adapter.
    
 0.803
tada2b
Transcriptional adapter.
    
 0.803
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
 0.775
cdc20
Cell division cycle 20 homolog.
    
 0.774
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.