STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rabgap1lRAB GTPase activating protein 1-like. (989 aa)    
Predicted Functional Partners:
LOC105026986
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
  0.650
LOC105026096
Uncharacterized protein.
   
  0.650
rab6b
Uncharacterized protein.
    
 0.533
rab6a
RAB6A, member RAS oncogene family.
    
 0.533
LOC105028793
Uncharacterized protein.
    
 0.533
RAB41
RAB41, member RAS oncogene family.
    
 0.533
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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