STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105007387Uncharacterized protein. (73 aa)    
Predicted Functional Partners:
LOC105014736
Phosphodiesterase.
   
 
 0.940
pde6a
Phosphodiesterase.
   
 
 0.940
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
   
 
 
0.907
LOC105005956
Uncharacterized protein.
  
  
 
0.904
LOC105017142
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 
 0.776
GNAT2
G protein subunit alpha transducin 2.
   
 
 0.776
LOC105022791
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 
 0.763
LOC105025436
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 
 0.746
LOC105025424
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
 
 0.730
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
   
 
 0.730
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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