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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSELUP00000001709SRY-box transcription factor 3. (166 aa)    
Predicted Functional Partners:
LOC105014844
POU domain protein.
    
 0.896
AMHR2
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 
 0.811
LOC105010230
Doublesex and mab-3 related transcription factor 1.
    
 0.731
klf17
Kruppel-like factor 17.
    
 0.644
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.639
wnt4
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
   
 
 0.609
amh
Anti-Mullerian hormone.
    
 0.592
sall4
Spalt-like transcription factor 4.
   
 0.568
LOC105014200
WT1 transcription factor b.
    
 0.504
LOC105030317
WT1 transcription factor a.
    
 0.504
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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