STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105022314Nuclear envelope integral membrane protein 1. (449 aa)    
Predicted Functional Partners:
LOC105016384
RAN binding protein 2.
   
 
 0.650
ccdc77
Coiled-coil domain containing 77.
   
  
 0.620
LOC105015661
Uncharacterized protein.
      
 0.596
gstcd
Glutathione S-transferase, C-terminal domain containing.
      
 0.594
ccdc34
Zgc:153293.
      
 0.593
cep85
Centrosomal protein 85.
      
 0.592
LOC105025787
RAN GTPase activating protein 1a.
   
 
 0.589
LOC105025082
Ran GTPase activating protein 1b.
   
 
 0.589
znf367
Zinc finger protein 367.
      
 0.588
gtf2e2
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
      
 0.585
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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