STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd63Tetraspanin. (241 aa)    
Predicted Functional Partners:
LOC105006632
Scavenger receptor class B, member 2c; Belongs to the CD36 family.
     
 0.919
LOC105014693
Scavenger receptor class B, member 2a; Belongs to the CD36 family.
     
 0.919
lamp2
Lysosomal-associated membrane protein 2.
    
 0.881
LAMP1
Lysosomal associated membrane protein 1.
   
 0.720
rab27a
RAB27A, member RAS oncogene family.
     
 0.681
tsg101
Tumor susceptibility 101a.
      
 0.669
CD9
Tetraspanin.
   
 
0.640
LOC105016567
Lysosomal associated membrane protein 1b.
   
 0.640
LOC105022199
Tetraspanin.
   
 
0.640
LOC105013764
Syndecan binding protein (syntenin) 2.
   
 0.623
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.