STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldb2LIM domain binding 2a. (385 aa)    
Predicted Functional Partners:
lmo2
LIM domain only 2 (rhombotin-like 1).
    
 0.893
LOC105022270
LIM domain only 1.
    
 0.851
lmo3
LIM domain only 3.
    
 0.851
tal1
T-cell acute lymphocytic leukemia 1.
    
 0.823
LOC105021124
Uncharacterized protein.
    
 0.823
LOC105017365
GATA binding protein 1a.
    
 0.676
lhx2
LIM homeobox 2b.
    
 0.659
LOC105028054
Uncharacterized protein.
    
 0.659
LHX2
LIM homeobox 2.
    
 0.659
lhx9
LIM homeobox 9.
    
 0.659
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.