STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
graspGRP1 (general receptor for phosphoinositides 1)-associated scaffold protein. (391 aa)    
Predicted Functional Partners:
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.592
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.582
ift172
Intraflagellar transport 172.
    
 0.578
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.572
ift88
Intraflagellar transport 88 homolog.
    
 0.564
cyth2
Cytohesin 2.
    
 
 0.544
cluap1
Clusterin associated protein 1.
    
 0.529
ift81
Intraflagellar transport 81 homolog.
    
 0.526
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.526
LOC105023750
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.517
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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