STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl53Mitochondrial ribosomal protein L53. (108 aa)    
Predicted Functional Partners:
mrpl47
39S ribosomal protein L47, mitochondrial.
    
 
 0.939
mrps18a
28S ribosomal protein S18a, mitochondrial.
   
 
 0.936
mrpl51
39S ribosomal protein L51, mitochondrial.
    
 
 0.932
mrpl40
39S ribosomal protein L40, mitochondrial.
   
 
 0.915
mrpl4
Mitochondrial 39S ribosomal protein L4.
   
 
 0.915
mrps33
Mitochondrial 28S ribosomal protein S33.
   
 
 0.911
mrpl10
Mitochondrial ribosomal protein L10.
   
 
 0.911
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.911
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.905
mrpl11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.902
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.