Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSELUP00000013122 | SYNPO2 | ENSELUP00000013122 | ENSELUP00000003206 | WD repeat domain 18. | Synaptopodin 2b. | 0.496 |
ENSELUP00000013122 | pes1 | ENSELUP00000013122 | ENSELUP00000001862 | WD repeat domain 18. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.964 |
ENSELUP00000013122 | tex10 | ENSELUP00000013122 | ENSELUP00000008276 | WD repeat domain 18. | Testis expressed 10. | 0.999 |
SMTN | SYNPO2 | ENSELUP00000014515 | ENSELUP00000003206 | Smoothelin. | Synaptopodin 2b. | 0.431 |
SYNPO2 | ENSELUP00000013122 | ENSELUP00000003206 | ENSELUP00000013122 | Synaptopodin 2b. | WD repeat domain 18. | 0.496 |
SYNPO2 | SMTN | ENSELUP00000003206 | ENSELUP00000014515 | Synaptopodin 2b. | Smoothelin. | 0.431 |
SYNPO2 | pes1 | ENSELUP00000003206 | ENSELUP00000001862 | Synaptopodin 2b. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.411 |
SYNPO2 | tex10 | ENSELUP00000003206 | ENSELUP00000008276 | Synaptopodin 2b. | Testis expressed 10. | 0.483 |
pes1 | ENSELUP00000013122 | ENSELUP00000001862 | ENSELUP00000013122 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | WD repeat domain 18. | 0.964 |
pes1 | SYNPO2 | ENSELUP00000001862 | ENSELUP00000003206 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Synaptopodin 2b. | 0.411 |
pes1 | tex10 | ENSELUP00000001862 | ENSELUP00000008276 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Testis expressed 10. | 0.897 |
tex10 | ENSELUP00000013122 | ENSELUP00000008276 | ENSELUP00000013122 | Testis expressed 10. | WD repeat domain 18. | 0.999 |
tex10 | SYNPO2 | ENSELUP00000008276 | ENSELUP00000003206 | Testis expressed 10. | Synaptopodin 2b. | 0.483 |
tex10 | pes1 | ENSELUP00000008276 | ENSELUP00000001862 | Testis expressed 10. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.897 |