STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF152Ring finger protein 152. (172 aa)    
Predicted Functional Partners:
LOC105026972
Ras-related GTP binding A.
    
 0.674
rps27a
Ribosomal protein S27a.
    
  0.648
ENSELUP00000003468
Ubiquitin-like domain-containing protein.
    
 0.609
LOC105005930
Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.544
LOC105022147
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.544
dnajc11
DnaJ (Hsp40) homolog, subfamily C, member 11a.
      
 0.454
LOC105024444
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.450
LOC105026211
Ubiquitin-like domain-containing protein.
    
  0.450
fem1b
Fem-1 homolog b (C. elegans).
    
 0.434
klhl22
Kelch-like family member 22.
    
 
 0.431
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.