Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC105018801 | brix1 | ENSELUP00000016021 | ENSELUP00000031505 | Uncharacterized protein. | Brix domain containing 2. | 0.999 |
LOC105018801 | ebna1bp2 | ENSELUP00000016021 | ENSELUP00000022610 | Uncharacterized protein. | EBNA1 binding protein 2. | 0.995 |
LOC105018801 | mak16 | ENSELUP00000016021 | ENSELUP00000007365 | Uncharacterized protein. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.994 |
LOC105018801 | mrto4 | ENSELUP00000016021 | ENSELUP00000010676 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.989 |
LOC105018801 | nifk | ENSELUP00000016021 | ENSELUP00000006885 | Uncharacterized protein. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.992 |
LOC105018801 | nip7 | ENSELUP00000016021 | ENSELUP00000016335 | Uncharacterized protein. | NIP7 nucleolar pre-rRNA processing protein. | 0.981 |
LOC105018801 | noc2l | ENSELUP00000016021 | ENSELUP00000007933 | Uncharacterized protein. | NOC2-like nucleolar associated transcriptional repressor. | 0.979 |
LOC105018801 | rpf1 | ENSELUP00000016021 | ENSELUP00000003411 | Uncharacterized protein. | Ribosome production factor 1 homolog. | 0.990 |
LOC105018801 | rsl1d1 | ENSELUP00000016021 | ENSELUP00000039165 | Uncharacterized protein. | Ribosomal L1 domain containing 1. | 0.996 |
LOC105018801 | wdr74 | ENSELUP00000016021 | ENSELUP00000036742 | Uncharacterized protein. | WD repeat domain 74. | 0.993 |
brix1 | LOC105018801 | ENSELUP00000031505 | ENSELUP00000016021 | Brix domain containing 2. | Uncharacterized protein. | 0.999 |
brix1 | ebna1bp2 | ENSELUP00000031505 | ENSELUP00000022610 | Brix domain containing 2. | EBNA1 binding protein 2. | 0.999 |
brix1 | mak16 | ENSELUP00000031505 | ENSELUP00000007365 | Brix domain containing 2. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.989 |
brix1 | mrto4 | ENSELUP00000031505 | ENSELUP00000010676 | Brix domain containing 2. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.992 |
brix1 | nifk | ENSELUP00000031505 | ENSELUP00000006885 | Brix domain containing 2. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.999 |
brix1 | nip7 | ENSELUP00000031505 | ENSELUP00000016335 | Brix domain containing 2. | NIP7 nucleolar pre-rRNA processing protein. | 0.996 |
brix1 | noc2l | ENSELUP00000031505 | ENSELUP00000007933 | Brix domain containing 2. | NOC2-like nucleolar associated transcriptional repressor. | 0.995 |
brix1 | rpf1 | ENSELUP00000031505 | ENSELUP00000003411 | Brix domain containing 2. | Ribosome production factor 1 homolog. | 0.996 |
brix1 | rsl1d1 | ENSELUP00000031505 | ENSELUP00000039165 | Brix domain containing 2. | Ribosomal L1 domain containing 1. | 0.996 |
brix1 | wdr74 | ENSELUP00000031505 | ENSELUP00000036742 | Brix domain containing 2. | WD repeat domain 74. | 0.989 |
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