STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105028843Contactin associated protein like 3. (1326 aa)    
Predicted Functional Partners:
actr10
Actin related protein 10; Belongs to the actin family.
    
 
 0.503
wars1
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.501
cntn2
Contactin 2.
   
 0.499
tbx15
T-box transcription factor 15.
      
 0.499
ENSELUP00000001629
Contactin 4.
   
 0.491
LOC105017382
Uncharacterized protein.
   
 0.491
ENSELUP00000042662
Contactin 5.
   
 0.491
LOC105005898
Contactin 3b.
   
 0.476
LOC105024871
Contactin 1b.
   
 0.476
CNTN1
Contactin 1.
   
 0.476
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.