STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSELUP00000004523USP6 N-terminal like. (853 aa)    
Predicted Functional Partners:
LOC105026986
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
 0.658
LOC105026096
Uncharacterized protein.
   
  0.650
rab43
RAB43, member RAS oncogene family.
    
 0.569
LOC105024882
Uncharacterized protein.
    
 0.569
RAB19
RAB19, member RAS oncogene family.
    
 0.569
LOC105016271
RAB5B, member RAS oncogene family.
    
 0.454
rab17
Uncharacterized protein.
    
 0.454
LOC105027630
Uncharacterized protein.
    
 0.454
rab5c
RAB5C, member RAS oncogene family.
    
 0.454
LOC105016952
Uncharacterized protein.
    
 0.454
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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