Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lg04h11orf80Uncharacterized protein. (459 aa)    
Predicted Functional Partners:
ccdc36
Uncharacterized protein.
      
 0.665
rec114
REC114 meiotic recombination protein.
      
 0.657
fbxo43
F-box protein 43.
      
 0.611
ENSELUP00000016759
Uncharacterized protein.
    
 
 0.580
spo11
SPO11 initiator of meiotic double stranded breaks.
    
 
 0.580
MCMDC2
Minichromosome maintenance domain containing 2.
      
 0.579
zswim7
Zinc finger, SWIM-type containing 7.
      
 0.573
MEI1
Meiotic double-stranded break formation protein 1.
      
 0.546
LOC105008757
FKBP prolyl isomerase like.
      
 0.484
terb2
Telomere repeat binding bouquet formation protein 2.
      
 0.481
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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