STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105007379Chemokine (C-C motif) receptor 10; Belongs to the G-protein coupled receptor 1 family. (412 aa)    
Predicted Functional Partners:
ccl28
SCY domain-containing protein.
     
  0.934
ccl21-2
C-C motif chemokine 21.
   
 0.790
LOC105027239
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.745
LOC105012114
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.664
ccl19
C-C motif chemokine 19.
   
 0.645
LOC105022442
Chemokine (C-C motif) ligand 25a.
    
 0.634
LOC105026796
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 
 0.606
cxcr5
Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family.
     
0.605
ccl20
C-C motif chemokine 20.
   
 0.599
LOC105025913
Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.
  
  
0.556
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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