STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcn3Reticulocalbin 3, EF-hand calcium binding domain. (321 aa)    
Predicted Functional Partners:
prrg2
Proline rich Gla (G-carboxyglutamic acid) 2.
      
 0.585
LOC105031305
FAM20C golgi associated secretory pathway kinase b.
    
  0.522
med25
Mediator complex subunit 25.
     
 0.500
LOC105013388
Shisa family member 9b.
      
 0.497
nosip
Nitric oxide synthase-interacting protein; Negatively regulates nitric oxide production by inducing nitric oxide synthase translocation to actin cytoskeleton and inhibiting its enzymatic activity; Belongs to the NOSIP family.
      
 0.461
LOC105031170
Fam20C domain-containing protein.
    
  0.448
immp1l
Mitochondrial inner membrane protease subunit.
      
 0.420
fam20b
FAM20B glycosaminoglycan xylosylkinase.
     
 0.408
LOC105026372
Calreticulin.
   
 
 0.401
ENSELUP00000014007
Calreticulin.
   
 
 0.401
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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