STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSELUP00000005125Notch receptor 3. (2393 aa)    
Predicted Functional Partners:
ENSELUP00000010095
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.810
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.810
maml1
Mastermind-like transcriptional coactivator 1.
   
 0.619
snw1
SNW domain containing 1.
    
 0.557
rps27a
Ribosomal protein S27a.
    
  0.534
LOC105011857
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
0.528
LOC105012315
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
0.528
LOC105017655
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
0.528
LOC105015548
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
0.528
jag1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
0.528
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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