STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coblCordon-bleu WH2 repeat protein. (1331 aa)    
Predicted Functional Partners:
itprid2
ITPR interacting domain containing 2.
      
 0.560
WHAMM
WASP homolog associated with actin, golgi membranes and microtubules.
    
 0.481
LOC105012314
Protein tyrosine kinase 7a; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.433
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.433
prr16
Proline rich 16.
      
 0.432
LOC105021310
Zgc:91999.
    
 
 0.425
LOC105012945
Si:ch211-51c14.1.
    
 
 0.425
pacsin3
Protein kinase C and casein kinase substrate in neurons 3.
    
 
 0.425
pacsin2
Protein kinase C and casein kinase substrate in neurons 2.
    
 
 0.425
pacsin1
Protein kinase C and casein kinase substrate in neurons 1a.
    
 
 0.425
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.