STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105020835Kelch-like family member 5. (775 aa)    
Predicted Functional Partners:
LOC105011392
Cullin 3; Belongs to the cullin family.
    
 0.770
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.770
rbx1
Zf-rbx1 domain-containing protein.
    
 0.743
sqstm1
Sequestosome 1.
    
 0.733
bbs9
Bardet-Biedl syndrome 9.
    
 0.715
bbs1
Bardet-Biedl syndrome 1.
    
 0.714
ttc8
Tetratricopeptide repeat domain 8.
    
 0.668
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.652
BBS4
Bardet-Biedl syndrome 4.
    
 0.587
LOC105018671
Bardet-Biedl syndrome 4.
    
 0.587
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.