STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSELUP00000007652Uncharacterized protein. (2385 aa)    
Predicted Functional Partners:
cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
   
 0.748
pot1
Protection of telomeres 1 homolog.
    
 
 0.710
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.693
cinp
Cyclin-dependent kinase 2 interacting protein.
    
 0.678
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.678
Rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.573
aurka
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.565
LOC105007115
Aurora kinase B; Belongs to the protein kinase superfamily.
    
 
 0.565
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 
 0.517
terf2ip
Uncharacterized protein.
   
 
 0.517
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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