STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lg17h3orf14Si:dkey-274m17.3. (145 aa)    
Predicted Functional Partners:
C18orf54
Chromosome 18 open reading frame 54.
      
 0.598
LOC105015661
Uncharacterized protein.
      
 0.596
carnmt1
Carnosine N-methyltransferase 1.
      
 0.592
ccdc77
Coiled-coil domain containing 77.
      
 0.592
DONSON
Downstream neighbor of SON.
      
 0.585
znf367
Zinc finger protein 367.
      
 0.583
mgme1
Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair. Belongs to the MGME1 family.
      
 0.582
ttc1
Tetratricopeptide repeat domain 1.
      
 0.524
NT5M
5',3'-nucleotidase, mitochondrial.
      
 0.424
ribc1
RIB43A domain with coiled-coils 1.
      
 0.420
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.