STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105011334Si:ch211-201h21.5. (325 aa)    
Predicted Functional Partners:
gda
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
  
 
 0.810
cda
Cytidine deaminase a.
  
 0.798
LOC105031489
Zgc:103586.
  
 0.798
amdhd1
Amidohydrolase domain containing 1.
  
 
 0.791
ENSELUP00000041342
Zgc:174895.
    
 0.784
ENSELUP00000041358
Zgc:174895.
    
 0.784
uprt
Uracil phosphoribosyltransferase.
   
 
 0.742
LOC105023903
Uracil phosphoribosyltransferase homolog.
   
 
 0.742
ENSELUP00000001279
Uncharacterized protein; Belongs to the 5'-nucleotidase family.
  
 
 0.666
mei4
5'-nucleotidase, ecto (CD73).
  
 
 0.666
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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