STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSELUP00000008220Inversin. (838 aa)    
Predicted Functional Partners:
ift88
Intraflagellar transport 88 homolog.
    
 0.753
nek8
NIMA-related kinase 8.
   
 0.704
nphp3
Nephronophthisis 3.
    
 0.678
nphp1
Nephronophthisis 1.
    
 0.668
NPHP4
Nephrocystin 4.
    
 
 0.633
NEK9
NIMA related kinase 9.
    
 0.632
ahi1
Abelson helper integration site 1.
    
 0.630
cep290
Centrosomal protein 290.
    
 0.616
ANKS6
Ankyrin repeat and sterile alpha motif domain containing 6.
    
 
0.614
dars2
Aspartyl-tRNA synthetase 2, mitochondrial.
     
 0.613
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.