Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam234bFamily with sequence similarity 234 member B. (723 aa)    
Predicted Functional Partners:
ENSELUP00000001443
Single-pass membrane protein with aspartate-rich tail 1b.
      
 0.703
prelid3b
PRELI/MSF1 domain-containing protein.
      
 0.623
LOC105028609
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.617
ENSELUP00000004054
Si:dkey-29b11.3.
      
 0.617
LOC105008231
Actin binding Rho activating protein a.
      
 0.617
tm9sf2
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.617
glg1
Golgi glycoprotein 1a.
      
 0.617
ENSELUP00000036872
Golgi glycoprotein 1b.
      
 0.617
nedd9
Neural precursor cell expressed, developmentally down-regulated 9.
      
 0.549
lnx1
Ligand of numb-protein X 1.
      
 0.505
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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