STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl4039S ribosomal protein L40, mitochondrial. (203 aa)    
Predicted Functional Partners:
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.997
mrpl13
39S ribosomal protein L13, mitochondrial.
   
 
 0.996
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.995
mrpl30
39S ribosomal protein L30, mitochondrial.
   
 
 0.994
mrpl32
39S ribosomal protein L32, mitochondrial.
   
   0.994
mrpl16
Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.994
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.994
mrpl41
39S ribosomal protein L41, mitochondrial.
   
 
 0.993
mrpl4
Mitochondrial 39S ribosomal protein L4.
   
 
 0.992
mrpl47
39S ribosomal protein L47, mitochondrial.
   
 
 0.991
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.