STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105028119Cytochrome b561 family, member D2. (220 aa)    
Predicted Functional Partners:
ints3
Integrator complex subunit 3.
   
   0.595
ints5
Integrator complex subunit 5.
   
   0.594
ints1
Integrator complex subunit 1.
    
   0.589
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.440
tmem115
Transmembrane protein 115.
      
 0.429
LOC105017343
Zinc finger, MYND-type containing 8.
    
 
 0.412
LOC105013999
Protein kinase C binding protein 1, like.
    
 
 0.412
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.