STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105007917SUMO specific peptidase 3a. (525 aa)    
Predicted Functional Partners:
ENSELUP00000013122
WD repeat domain 18.
    
 0.767
tex10
Testis expressed 10.
    
 0.766
sumo1
Small ubiquitin-related modifier.
   
 0.704
LOC105007016
Small ubiquitin-related modifier.
   
 0.704
sumo2
Small ubiquitin like modifier 2b.
   
 0.682
SUMO3
Small ubiquitin-related modifier.
   
 0.682
SUMO3-2
Small ubiquitin-related modifier.
   
 0.682
LOC105012271
Small ubiquitin-related modifier.
   
 0.682
nfatc2ip
Nuclear factor of activated T cells 2 interacting protein.
   
 0.676
las1l
LAS1-like, ribosome biogenesis factor.
   
 0.641
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.