STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105020883Family with sequence similarity 102 member Ba. (372 aa)    
Predicted Functional Partners:
LOC105022044
Transport protein Sec61 subunit gamma.
   
 
 0.578
LOC105024243
Transport protein Sec61 subunit gamma.
   
 
 0.578
Pin1
WW domain-containing protein.
    
 0.462
LOC105020911
Uncharacterized protein.
    
 
 0.452
gpsm2
Uncharacterized protein.
    
 
 0.452
tlnrd1
Talin rod domain containing 1.
    
 0.442
ENSELUP00000017296
Talin 1.
    
 0.442
LOC105022628
Talin 2a.
    
 0.442
LOC105025693
Talin 2b.
    
 0.442
LOC105012700
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
   
 0.432
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.