STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSELUP00000010015AA_permease_C domain-containing protein. (599 aa)    
Predicted Functional Partners:
ppargc1a
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
   
  
 0.603
ppargc1b
Peroxisome proliferator-activated receptor gamma, coactivator 1 beta.
      
 0.587
slc1a1
Amino acid transporter.
      
 0.582
slc3a1
Solute carrier family 3 member 1.
   
 0.558
LOC105021450
Uncharacterized protein.
  
 
 0.539
Slc7a10
Solute carrier family 7 member 10a.
  
 
 0.539
LOC105018092
Solute carrier family 7 member 10b.
  
 
 0.537
LOC105020553
Solute carrier family 7 member 8a.
  
 
 0.532
slc1a4
Amino acid transporter.
   
  
 0.529
slc1a5
Solute carrier family 1 member 5.
   
  
 0.529
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.