STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105023830NAC-A/B domain-containing protein. (373 aa)    
Predicted Functional Partners:
btf3
Transcription factor BTF3; Belongs to the NAC-beta family.
   
 
 0.958
rpl18
Ribosomal protein L18.
   
 
 0.945
rpl24
Ribosomal protein L24.
   
   0.941
rpl7a
Ribosomal protein L7a.
   
 
 0.940
rpl23a
Ribosomal protein L23a.
   
 
 0.938
rpl9
60S ribosomal protein L9.
   
   0.923
rpl18a
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 
 0.922
rpl4
Ribosomal protein L4.
   
 
 0.921
rpl17
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.920
rpl6
Ribosomal protein L6.
   
   0.920
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.