STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nwd2NACHT and WD repeat domain containing 2. (1708 aa)    
Predicted Functional Partners:
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.677
taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.667
taf9
Uncharacterized protein.
    
 0.663
nlrx1
NLR family member X1.
      
 0.662
ENSELUP00000035812
NLR family member X1.
      
 0.662
taf10
Uncharacterized protein.
    
 0.661
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.653
ENSELUP00000006433
WD repeat domain 19.
    
 0.642
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
   
 0.637
tex10
Testis expressed 10.
   
 0.623
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.