STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105023800Angiomotin_C domain-containing protein. (1038 aa)    
Predicted Functional Partners:
LOC105030880
Neurofibromin 2b (merlin).
    
 0.960
nf2
Neurofibromin 2a (merlin).
    
 0.960
LOC105013023
Rho GTPase activating protein 17b.
    
 0.926
ENSELUP00000019548
Rho GTPase activating protein 17.
    
 0.926
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.908
wwtr1
WW domain containing transcription regulator 1.
    
 0.737
yap1
Yes-associated protein 1.
    
 0.737
Lats1
Large tumor suppressor kinase 1.
    
 0.731
lats2
Large tumor suppressor kinase 2.
    
 0.703
ENSELUP00000038723
Uncharacterized protein.
    
 0.680
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.