STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105031429Immunoglobulin superfamily, member 8. (632 aa)    
Predicted Functional Partners:
CD9
Tetraspanin.
    
 
 0.776
LOC105022199
Tetraspanin.
    
 
 0.776
tspan3
Tetraspanin.
    
 
 0.633
OAZ2
Ornithine decarboxylase antizyme 2a.
      
 0.584
cd81
Tetraspanin.
    
 
 0.553
LOC105018197
Tetraspanin.
    
 
 0.553
acbd6
Acyl-CoA binding domain containing 6.
      
 0.519
trmt13
tRNA methyltransferase 13 homolog.
      
 0.464
lg17h12orf10
Melanocyte proliferating gene 1.
      
 0.458
rtca
RNA 3'-terminal phosphate cyclase.
      
 0.447
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.