STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc96Coiled-coil domain containing 96. (547 aa)    
Predicted Functional Partners:
ENSELUP00000001617
AT rich interactive domain 4A (RBP1-like).
    
 0.866
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.866
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.672
sin3a
SIN3 transcription regulator family member Aa.
   
 0.664
sin3b
SIN3 transcription regulator family member B.
   
 0.664
LOC105014060
SIN3 transcription regulator family member Ab.
   
 0.664
LOC105016384
RAN binding protein 2.
   
 0.635
efcab1
EF-hand calcium binding domain 1.
    
 0.631
lg13h9orf116
Uncharacterized protein.
   
  
 0.611
lg04h4orf47
Zgc:153146.
    
 0.606
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.