STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc17a5Solute carrier family 17 member 5. (492 aa)    
Predicted Functional Partners:
LOC105027910
Si:ch1073-513e17.1.
  
  
 
0.903
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.779
wdfy2
WD repeat and FYVE domain containing 2.
      
 0.578
RIMS1
Regulating synaptic membrane exocytosis 1.
     
 0.510
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.470
LOC105015953
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.470
VAMP2
Vesicle associated membrane protein 2.
   
 
 0.465
LOC105025855
Vesicle-associated membrane protein 1.
   
 
 0.465
LOC105019076
Zgc:92912.
   
 
 0.465
LOC105030656
Synaptotagmin Vb.
   
 
 0.461
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.