STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccpg1Uncharacterized protein. (903 aa)    
Predicted Functional Partners:
rb1cc1
RB1-inducible coiled-coil 1.
   
 0.953
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.813
sec62
SEC62 homolog, preprotein translocation factor.
   
 
 0.610
retreg1
Reticulophagy regulator 1.
    
 
 0.590
LOC105016384
RAN binding protein 2.
    
 0.553
retreg2
Reticulophagy regulator family member 2.
    
 
 0.518
rbbp5
Retinoblastoma binding protein 5.
    
 0.509
ENSELUP00000002257
Uncharacterized protein.
   
 0.508
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.507
LOC105024598
Lysine (K)-specific demethylase 6B, b.
    
 0.489
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.