Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUL3 | LOC105011392 | ENSELUP00000033357 | ENSELUP00000016136 | Cullin 3; Belongs to the cullin family. | Cullin 3; Belongs to the cullin family. | 0.900 |
CUL3 | klhl21 | ENSELUP00000033357 | ENSELUP00000004115 | Cullin 3; Belongs to the cullin family. | Kelch-like family member 21. | 0.796 |
CUL3 | klhl22 | ENSELUP00000033357 | ENSELUP00000018825 | Cullin 3; Belongs to the cullin family. | Kelch-like family member 22. | 0.825 |
CUL3 | klhl26 | ENSELUP00000033357 | ENSELUP00000012144 | Cullin 3; Belongs to the cullin family. | Kelch-like family member 26. | 0.559 |
CUL3 | mib2 | ENSELUP00000033357 | ENSELUP00000036998 | Cullin 3; Belongs to the cullin family. | Mindbomb E3 ubiquitin protein ligase 2. | 0.779 |
CUL3 | nae1 | ENSELUP00000033357 | ENSELUP00000009188 | Cullin 3; Belongs to the cullin family. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. | 0.774 |
CUL3 | ubxn7 | ENSELUP00000033357 | ENSELUP00000004627 | Cullin 3; Belongs to the cullin family. | UBX domain protein 7. | 0.979 |
LOC105011392 | CUL3 | ENSELUP00000016136 | ENSELUP00000033357 | Cullin 3; Belongs to the cullin family. | Cullin 3; Belongs to the cullin family. | 0.900 |
LOC105011392 | klhl21 | ENSELUP00000016136 | ENSELUP00000004115 | Cullin 3; Belongs to the cullin family. | Kelch-like family member 21. | 0.796 |
LOC105011392 | klhl22 | ENSELUP00000016136 | ENSELUP00000018825 | Cullin 3; Belongs to the cullin family. | Kelch-like family member 22. | 0.825 |
LOC105011392 | klhl26 | ENSELUP00000016136 | ENSELUP00000012144 | Cullin 3; Belongs to the cullin family. | Kelch-like family member 26. | 0.559 |
LOC105011392 | mib2 | ENSELUP00000016136 | ENSELUP00000036998 | Cullin 3; Belongs to the cullin family. | Mindbomb E3 ubiquitin protein ligase 2. | 0.779 |
LOC105011392 | nae1 | ENSELUP00000016136 | ENSELUP00000009188 | Cullin 3; Belongs to the cullin family. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. | 0.774 |
LOC105011392 | ubxn7 | ENSELUP00000016136 | ENSELUP00000004627 | Cullin 3; Belongs to the cullin family. | UBX domain protein 7. | 0.979 |
bbs7 | bbs9 | ENSELUP00000001375 | ENSELUP00000032345 | Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. | Bardet-Biedl syndrome 9. | 0.997 |
bbs7 | klhl21 | ENSELUP00000001375 | ENSELUP00000004115 | Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. | Kelch-like family member 21. | 0.500 |
bbs7 | klhl22 | ENSELUP00000001375 | ENSELUP00000018825 | Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. | Kelch-like family member 22. | 0.652 |
bbs7 | klhl26 | ENSELUP00000001375 | ENSELUP00000012144 | Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. | Kelch-like family member 26. | 0.500 |
bbs7 | ttc8 | ENSELUP00000001375 | ENSELUP00000030356 | Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. | Tetratricopeptide repeat domain 8. | 0.992 |
bbs9 | bbs7 | ENSELUP00000032345 | ENSELUP00000001375 | Bardet-Biedl syndrome 9. | Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. | 0.997 |
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