STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105024799Plexin b1b. (2027 aa)    
Predicted Functional Partners:
SEMA4D
Semaphorin 4D; Belongs to the semaphorin family.
    
0.699
LOC105020462
Semaphorin 4e; Belongs to the semaphorin family.
    
0.672
LOC105011604
Si:ch211-129c21.1; Belongs to the semaphorin family.
    
 0.672
LOC105024085
Uncharacterized protein; Belongs to the semaphorin family.
    
0.672
sema5a
Sema domain-containing protein.
    
0.658
nrp1
Neuropilin; Belongs to the neuropilin family.
    
 0.658
LOC105023165
Sema domain-containing protein.
    
0.616
sema5b
Sema domain-containing protein.
    
0.616
LOC105018428
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family.
    
 0.569
LOC105023828
Rho family GTPase 1b.
    
 0.554
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.