Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC105011555 | ascl1 | ENSELUP00000038503 | ENSELUP00000001845 | Transcription factor 3b. | Achaete-scute family bHLH transcription factor 1a. | 0.797 |
LOC105011555 | id2 | ENSELUP00000038503 | ENSELUP00000012874 | Transcription factor 3b. | DNA-binding protein inhibitor ID-2. | 0.551 |
LOC105011555 | myog | ENSELUP00000038503 | ENSELUP00000033588 | Transcription factor 3b. | Myogenin. | 0.704 |
LOC105014505 | LOC105021104 | ENSELUP00000043012 | ENSELUP00000037327 | Mothers against decapentaplegic homolog. | Kruppel-like factor 13. | 0.614 |
LOC105014505 | id2 | ENSELUP00000043012 | ENSELUP00000012874 | Mothers against decapentaplegic homolog. | DNA-binding protein inhibitor ID-2. | 0.581 |
LOC105018350 | ascl1 | ENSELUP00000003666 | ENSELUP00000001845 | BHLH domain-containing protein. | Achaete-scute family bHLH transcription factor 1a. | 0.789 |
LOC105018350 | id2 | ENSELUP00000003666 | ENSELUP00000012874 | BHLH domain-containing protein. | DNA-binding protein inhibitor ID-2. | 0.551 |
LOC105018350 | myog | ENSELUP00000003666 | ENSELUP00000033588 | BHLH domain-containing protein. | Myogenin. | 0.673 |
LOC105020565 | ascl1 | ENSELUP00000007535 | ENSELUP00000001845 | Transcription factor 3a. | Achaete-scute family bHLH transcription factor 1a. | 0.797 |
LOC105020565 | id2 | ENSELUP00000007535 | ENSELUP00000012874 | Transcription factor 3a. | DNA-binding protein inhibitor ID-2. | 0.551 |
LOC105020565 | myog | ENSELUP00000007535 | ENSELUP00000033588 | Transcription factor 3a. | Myogenin. | 0.708 |
LOC105021104 | LOC105014505 | ENSELUP00000037327 | ENSELUP00000043012 | Kruppel-like factor 13. | Mothers against decapentaplegic homolog. | 0.614 |
LOC105021104 | id2 | ENSELUP00000037327 | ENSELUP00000012874 | Kruppel-like factor 13. | DNA-binding protein inhibitor ID-2. | 0.580 |
LOC105021104 | smad2 | ENSELUP00000037327 | ENSELUP00000012763 | Kruppel-like factor 13. | Mothers against decapentaplegic homolog. | 0.614 |
TCF4 | ascl1 | ENSELUP00000035940 | ENSELUP00000001845 | Transcription factor 4. | Achaete-scute family bHLH transcription factor 1a. | 0.797 |
TCF4 | id2 | ENSELUP00000035940 | ENSELUP00000012874 | Transcription factor 4. | DNA-binding protein inhibitor ID-2. | 0.551 |
TCF4 | myog | ENSELUP00000035940 | ENSELUP00000033588 | Transcription factor 4. | Myogenin. | 0.708 |
ascl1 | LOC105011555 | ENSELUP00000001845 | ENSELUP00000038503 | Achaete-scute family bHLH transcription factor 1a. | Transcription factor 3b. | 0.797 |
ascl1 | LOC105018350 | ENSELUP00000001845 | ENSELUP00000003666 | Achaete-scute family bHLH transcription factor 1a. | BHLH domain-containing protein. | 0.789 |
ascl1 | LOC105020565 | ENSELUP00000001845 | ENSELUP00000007535 | Achaete-scute family bHLH transcription factor 1a. | Transcription factor 3a. | 0.797 |
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