STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hdhd2Haloacid dehalogenase-like hydrolase domain containing 2. (341 aa)    
Predicted Functional Partners:
rrp9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
      
 0.505
atp5pb
Uncharacterized protein.
   
  
 0.475
ndufa9
NADH:ubiquinone oxidoreductase subunit A9a.
   
  
 0.464
WDR70
WD repeat domain 70.
      
 0.459
LOC105014733
FYN binding protein b.
      
 0.452
ndufb7
NADH:ubiquinone oxidoreductase subunit B7.
   
  
 0.443
Ndufb3
NADH:ubiquinone oxidoreductase subunit B3.
   
  
 0.441
ndufb10
NADH dehydrogenase 1 beta subcomplex subunit 10.
      
 0.428
ttc38
Tetratricopeptide repeat domain 38.
      
 0.426
ENSELUP00000012611
Phosphoserine aminotransferase 1.
  
 
 0.425
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.