STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105026214G domain-containing protein. (377 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
   0.843
mrpl3
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.702
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.700
LOC105008177
Mitochondrial 39S ribosomal protein L23.
   
 
 0.699
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.696
mrpl22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.678
mrpl47
39S ribosomal protein L47, mitochondrial.
   
 
 0.674
mrpl33
Mitochondrial 39S ribosomal protein L33.
   
 
 0.673
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.670
mrpl4
Mitochondrial 39S ribosomal protein L4.
   
 
 0.667
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.