STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grwd1Glutamate-rich WD repeat containing 1. (484 aa)    
Predicted Functional Partners:
noc2l
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.964
pwp1
PWP1 homolog, endonuclein.
   
  
0.953
wdr36
WD repeat domain 36.
   
 
 0.950
rsl1d1
Ribosomal L1 domain containing 1.
   
 
 0.948
LOC105019722
PWP2 small subunit processome component.
   
  
 0.944
bop1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.944
bysl
Bystin-like.
   
  
 0.935
cep152
Centrosomal protein 152.
   
 
 0.934
ddx56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
   
 
 0.932
ddx18
RNA helicase.
   
 
 0.932
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.