Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC105007471 | LOC105028132 | ENSELUP00000038961 | ENSELUP00000016058 | LIM-domain binding 1b. | LIM homeobox 8b. | 0.551 |
LOC105007471 | figla | ENSELUP00000038961 | ENSELUP00000004827 | LIM-domain binding 1b. | Folliculogenesis specific bHLH transcription factor. | 0.431 |
LOC105009381 | LOC105028132 | ENSELUP00000040936 | ENSELUP00000016058 | LIM domain binding 1a. | LIM homeobox 8b. | 0.551 |
LOC105009381 | figla | ENSELUP00000040936 | ENSELUP00000004827 | LIM domain binding 1a. | Folliculogenesis specific bHLH transcription factor. | 0.431 |
LOC105028132 | LOC105007471 | ENSELUP00000016058 | ENSELUP00000038961 | LIM homeobox 8b. | LIM-domain binding 1b. | 0.551 |
LOC105028132 | LOC105009381 | ENSELUP00000016058 | ENSELUP00000040936 | LIM homeobox 8b. | LIM domain binding 1a. | 0.551 |
LOC105028132 | figla | ENSELUP00000016058 | ENSELUP00000004827 | LIM homeobox 8b. | Folliculogenesis specific bHLH transcription factor. | 0.488 |
LOC105028132 | ldb2 | ENSELUP00000016058 | ENSELUP00000001804 | LIM homeobox 8b. | LIM domain binding 2a. | 0.551 |
figla | LOC105007471 | ENSELUP00000004827 | ENSELUP00000038961 | Folliculogenesis specific bHLH transcription factor. | LIM-domain binding 1b. | 0.431 |
figla | LOC105009381 | ENSELUP00000004827 | ENSELUP00000040936 | Folliculogenesis specific bHLH transcription factor. | LIM domain binding 1a. | 0.431 |
figla | LOC105028132 | ENSELUP00000004827 | ENSELUP00000016058 | Folliculogenesis specific bHLH transcription factor. | LIM homeobox 8b. | 0.488 |
figla | ldb2 | ENSELUP00000004827 | ENSELUP00000001804 | Folliculogenesis specific bHLH transcription factor. | LIM domain binding 2a. | 0.431 |
ldb2 | LOC105028132 | ENSELUP00000001804 | ENSELUP00000016058 | LIM domain binding 2a. | LIM homeobox 8b. | 0.551 |
ldb2 | figla | ENSELUP00000001804 | ENSELUP00000004827 | LIM domain binding 2a. | Folliculogenesis specific bHLH transcription factor. | 0.431 |