Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSELUP00000023913 | Prss56 | ENSELUP00000023913 | ENSELUP00000010422 | Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. | Serine protease 56; Belongs to the peptidase S1 family. | 0.461 |
ENSELUP00000023913 | tmem98 | ENSELUP00000023913 | ENSELUP00000016385 | Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. | Transmembrane protein 98. | 0.550 |
ENSELUP00000031289 | Prss56 | ENSELUP00000031289 | ENSELUP00000010422 | Membrane frizzled-related protein. | Serine protease 56; Belongs to the peptidase S1 family. | 0.587 |
ENSELUP00000031289 | tmem98 | ENSELUP00000031289 | ENSELUP00000016385 | Membrane frizzled-related protein. | Transmembrane protein 98. | 0.577 |
Prss56 | ENSELUP00000023913 | ENSELUP00000010422 | ENSELUP00000023913 | Serine protease 56; Belongs to the peptidase S1 family. | Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. | 0.461 |
Prss56 | ENSELUP00000031289 | ENSELUP00000010422 | ENSELUP00000031289 | Serine protease 56; Belongs to the peptidase S1 family. | Membrane frizzled-related protein. | 0.587 |
Prss56 | tmem98 | ENSELUP00000010422 | ENSELUP00000016385 | Serine protease 56; Belongs to the peptidase S1 family. | Transmembrane protein 98. | 0.661 |
kansl3 | tmem98 | ENSELUP00000018023 | ENSELUP00000016385 | KAT8 regulatory NSL complex subunit 3. | Transmembrane protein 98. | 0.424 |
sdhaf2 | tmem98 | ENSELUP00000009051 | ENSELUP00000016385 | Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SDHA of the SDH catalytic dimer. | Transmembrane protein 98. | 0.440 |
tmem98 | ENSELUP00000023913 | ENSELUP00000016385 | ENSELUP00000023913 | Transmembrane protein 98. | Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. | 0.550 |
tmem98 | ENSELUP00000031289 | ENSELUP00000016385 | ENSELUP00000031289 | Transmembrane protein 98. | Membrane frizzled-related protein. | 0.577 |
tmem98 | Prss56 | ENSELUP00000016385 | ENSELUP00000010422 | Transmembrane protein 98. | Serine protease 56; Belongs to the peptidase S1 family. | 0.661 |
tmem98 | kansl3 | ENSELUP00000016385 | ENSELUP00000018023 | Transmembrane protein 98. | KAT8 regulatory NSL complex subunit 3. | 0.424 |
tmem98 | sdhaf2 | ENSELUP00000016385 | ENSELUP00000009051 | Transmembrane protein 98. | Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SDHA of the SDH catalytic dimer. | 0.440 |