Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC105013051 | MMP23B | ENSELUP00000013965 | ENSELUP00000016813 | TIMP metallopeptidase inhibitor 2b. | Matrix metallopeptidase 23B. | 0.520 |
LOC105013051 | TIMP3 | ENSELUP00000013965 | ENSELUP00000034857 | TIMP metallopeptidase inhibitor 2b. | TIMP metallopeptidase inhibitor 3. | 0.511 |
MMP23B | LOC105013051 | ENSELUP00000016813 | ENSELUP00000013965 | Matrix metallopeptidase 23B. | TIMP metallopeptidase inhibitor 2b. | 0.520 |
MMP23B | TIMP3 | ENSELUP00000016813 | ENSELUP00000034857 | Matrix metallopeptidase 23B. | TIMP metallopeptidase inhibitor 3. | 0.466 |
MMP23B | timp2 | ENSELUP00000016813 | ENSELUP00000018652 | Matrix metallopeptidase 23B. | TIMP metallopeptidase inhibitor 2a. | 0.477 |
MMP23B | timp4 | ENSELUP00000016813 | ENSELUP00000034394 | Matrix metallopeptidase 23B. | TIMP metallopeptidase inhibitor 4, tandem duplicate 3. | 0.457 |
TIMP3 | LOC105013051 | ENSELUP00000034857 | ENSELUP00000013965 | TIMP metallopeptidase inhibitor 3. | TIMP metallopeptidase inhibitor 2b. | 0.511 |
TIMP3 | MMP23B | ENSELUP00000034857 | ENSELUP00000016813 | TIMP metallopeptidase inhibitor 3. | Matrix metallopeptidase 23B. | 0.466 |
TIMP3 | timp2 | ENSELUP00000034857 | ENSELUP00000018652 | TIMP metallopeptidase inhibitor 3. | TIMP metallopeptidase inhibitor 2a. | 0.503 |
timp2 | MMP23B | ENSELUP00000018652 | ENSELUP00000016813 | TIMP metallopeptidase inhibitor 2a. | Matrix metallopeptidase 23B. | 0.477 |
timp2 | TIMP3 | ENSELUP00000018652 | ENSELUP00000034857 | TIMP metallopeptidase inhibitor 2a. | TIMP metallopeptidase inhibitor 3. | 0.503 |
timp4 | MMP23B | ENSELUP00000034394 | ENSELUP00000016813 | TIMP metallopeptidase inhibitor 4, tandem duplicate 3. | Matrix metallopeptidase 23B. | 0.457 |