STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSELUP00000017161BHLH domain-containing protein. (244 aa)    
Predicted Functional Partners:
ENSELUP00000023491
T-box transcription factor 6.
    
 0.601
LOC105006409
Ripply transcriptional repressor 1.
      
 0.579
LOC105015087
Uncharacterized protein.
    
 0.542
LOC105014021
T-box transcription factor 16.
    
 0.542
LOC105030988
Uncharacterized protein.
    
 0.542
LOC106024340
Hairy and enhancer of split related-7.
  
 
 
 0.531
LOC105018350
BHLH domain-containing protein.
    
 0.499
LOC105020565
Transcription factor 3a.
    
 0.499
tcf12
Transcription factor 12.
    
 0.499
TCF4
Transcription factor 4.
    
 0.499
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.