STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pou3f1POU domain protein. (350 aa)    
Predicted Functional Partners:
pcf11
PCF11 cleavage and polyadenylation factor subunit.
     
 0.484
ENSELUP00000002075
Uncharacterized protein.
    
  0.471
gtf2b
General transcription factor IIB.
    
 0.445
taf9
Uncharacterized protein.
     
 0.431
snapc3
Small nuclear RNA activating complex, polypeptide 3.
   
 
  0.426
bsx
Brain-specific homeobox.
   
 0.421
gtf2e1
General transcription factor IIE, polypeptide 1, alpha.
    
  0.419
sox10
SRY-box transcription factor 10.
    
 0.418
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.