Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSELUP00000009042 | LOC105021959 | ENSELUP00000009042 | ENSELUP00000013934 | Cytoplasmic FMR1 interacting protein 1. | WASP family member 3b. | 0.839 |
ENSELUP00000009042 | LOC105027669 | ENSELUP00000009042 | ENSELUP00000022522 | Cytoplasmic FMR1 interacting protein 1. | WASP family member 3a. | 0.839 |
ENSELUP00000009042 | LOC109614578 | ENSELUP00000009042 | ENSELUP00000036764 | Cytoplasmic FMR1 interacting protein 1. | Abl-interactor 1b. | 0.952 |
ENSELUP00000009042 | arpc2 | ENSELUP00000009042 | ENSELUP00000023631 | Cytoplasmic FMR1 interacting protein 1. | Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | 0.735 |
ENSELUP00000009042 | arpc3 | ENSELUP00000009042 | ENSELUP00000032626 | Cytoplasmic FMR1 interacting protein 1. | Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | 0.740 |
ENSELUP00000009042 | arpc4 | ENSELUP00000009042 | ENSELUP00000005407 | Cytoplasmic FMR1 interacting protein 1. | Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. | 0.582 |
ENSELUP00000009042 | arpc4-2 | ENSELUP00000009042 | ENSELUP00000016968 | Cytoplasmic FMR1 interacting protein 1. | Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. | 0.582 |
ENSELUP00000009042 | brk1 | ENSELUP00000009042 | ENSELUP00000018089 | Cytoplasmic FMR1 interacting protein 1. | BRICK1 subunit of SCAR/WAVE actin nucleating complex. | 0.968 |
ENSELUP00000009042 | cyfip2 | ENSELUP00000009042 | ENSELUP00000005088 | Cytoplasmic FMR1 interacting protein 1. | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | 0.669 |
ENSELUP00000009042 | nckap1 | ENSELUP00000009042 | ENSELUP00000009515 | Cytoplasmic FMR1 interacting protein 1. | NCK-associated protein 1. | 0.920 |
LOC105021959 | ENSELUP00000009042 | ENSELUP00000013934 | ENSELUP00000009042 | WASP family member 3b. | Cytoplasmic FMR1 interacting protein 1. | 0.839 |
LOC105021959 | LOC105027669 | ENSELUP00000013934 | ENSELUP00000022522 | WASP family member 3b. | WASP family member 3a. | 0.902 |
LOC105021959 | LOC109614578 | ENSELUP00000013934 | ENSELUP00000036764 | WASP family member 3b. | Abl-interactor 1b. | 0.958 |
LOC105021959 | arpc2 | ENSELUP00000013934 | ENSELUP00000023631 | WASP family member 3b. | Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | 0.847 |
LOC105021959 | arpc3 | ENSELUP00000013934 | ENSELUP00000032626 | WASP family member 3b. | Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | 0.859 |
LOC105021959 | arpc4 | ENSELUP00000013934 | ENSELUP00000005407 | WASP family member 3b. | Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. | 0.798 |
LOC105021959 | arpc4-2 | ENSELUP00000013934 | ENSELUP00000016968 | WASP family member 3b. | Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. | 0.798 |
LOC105021959 | brk1 | ENSELUP00000013934 | ENSELUP00000018089 | WASP family member 3b. | BRICK1 subunit of SCAR/WAVE actin nucleating complex. | 0.957 |
LOC105021959 | cyfip2 | ENSELUP00000013934 | ENSELUP00000005088 | WASP family member 3b. | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | 0.970 |
LOC105021959 | nckap1 | ENSELUP00000013934 | ENSELUP00000009515 | WASP family member 3b. | NCK-associated protein 1. | 0.948 |
page 1 of 6